reanno::Cup4G11:RR42_RS04420 has 160 amino acids
Query: DUF1854 [M=130]
Accession: PF08909.15
Description: Domain of unknown function (DUF1854)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.2e-57 176.8 0.0 9.8e-57 176.6 0.0 1.1 1 reanno::Cup4G11:RR42_RS04420
Domain annotation for each sequence (and alignments):
>> reanno::Cup4G11:RR42_RS04420
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 176.6 0.0 9.8e-57 9.8e-57 1 130 [] 30 159 .. 30 159 .. 0.99
Alignments for each domain:
== domain 1 score: 176.6 bits; conditional E-value: 9.8e-57
DUF1854 1 yegvepvrafPisapdeyislvdadgkElaliedladLdeesrklleeeLarrefvpeIkrilsvsekatpseweveTdrG 81
++gv+pvrafPi+apd++++lv+adg+Ela++ +l++L++ r+++e+eLa+ref+peI+ri+svs++atps+weveTdrG
reanno::Cup4G11:RR42_RS04420 30 HDGVVPVRAFPIAAPDDGVGLVSADGRELAWLPRLDTLPAPVREMIEAELASREFMPEIRRIRSVSTYATPSTWEVETDRG 110
89******************************************************************************* PP
DUF1854 82 ettfvlkgeedirrlsskrllitDsdgnryeipdlkaLdkksrklLerf 130
t++vl+geedirrl++++lli+Ds+g++y++++l++Ldk srk+L+rf
reanno::Cup4G11:RR42_RS04420 111 LTSLVLRGEEDIRRLAGSTLLISDSHGIHYLVRNLASLDKGSRKILDRF 159
***********************************************98 PP
Or compare reanno::Cup4G11:RR42_RS04420 to CDD or PaperBLAST