reanno::Cup4G11:RR42_RS34240 has 105 amino acids
Query: UPF0060 [M=107]
Accession: PF02694.19
Description: Uncharacterised BCR, YnfA/UPF0060 family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-39 121.1 8.0 1.4e-39 120.9 8.0 1.0 1 reanno::Cup4G11:RR42_RS34240
Domain annotation for each sequence (and alignments):
>> reanno::Cup4G11:RR42_RS34240
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 120.9 8.0 1.4e-39 1.4e-39 3 106 .. 2 105 .] 1 105 [] 0.98
Alignments for each domain:
== domain 1 score: 120.9 bits; conditional E-value: 1.4e-39
UPF0060 3 rsillfllaalaeigGaylvwlwlreaksvllalvaaillavygflatlqpaafGrvyaayGGvfvvlallwglvvdgvkl 83
++ l+l++a aei G+y+++lwlr+++s++l++++a++la++++l++l+p a+GrvyaayGG+++++a+lw+++vdgvk+
reanno::Cup4G11:RR42_RS34240 2 KTFALYLITACAEILGCYFPYLWLRQGASAWLLVPGALSLALFAWLLSLHPDASGRVYAAYGGIYIAVAILWLWLVDGVKP 82
78899**************************************************************************** PP
UPF0060 84 dlydwiGalialvGvlvilyapr 106
+d+ G ++a++G+++i++ pr
reanno::Cup4G11:RR42_RS34240 83 SHWDLAGVAVAIAGMAMIVFQPR 105
********************987 PP
Or compare reanno::Cup4G11:RR42_RS34240 to CDD or PaperBLAST