reanno::psRCH2:GFF1089 has 601 amino acids
Query: DUF1302 [M=541]
Accession: PF06980.17
Description: Protein of unknown function (DUF1302)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-175 571.8 14.3 1.2e-175 571.6 14.3 1.0 1 reanno::psRCH2:GFF1089
Domain annotation for each sequence (and alignments):
>> reanno::psRCH2:GFF1089
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 571.6 14.3 1.2e-175 1.2e-175 5 541 .] 14 601 .] 11 601 .] 0.96
Alignments for each domain:
== domain 1 score: 571.6 bits; conditional E-value: 1.2e-175
DUF1302 5 laaalaallaagpaqAveseeddgvegsldttlsygagvrtedrdpsligkanggaaasangddGnlnfdkgdlvsnrlkatseldl 91
++a+++al++a+pa+Av +++ +++eg++d+++s+ga++ t drd +l+g +ngg+ ++ +gddG+lnf+kg+++s+ +k+ ++l+l
reanno::psRCH2:GFF1089 14 SLALAVALSIAAPAYAV-NFNIGEIEGQFDSSMSIGASWSTTDRDMDLVGINNGGTGFTQTGDDGRLNFKKGETFSKIFKGVHDLEL 99
688999999999*****.********************************************************************* PP
DUF1302 92 kygnygffvrgkafyDavydnknedesaaatnknsqagngdsddardeagrgaelldaYvygsfdlgdrplsvRlGrQvvnWGeslf 178
+y++ g+f+rgk++yD+ ++++++ +++ + ds+ ++ ++ +ga++lda+vy++++lgd p +vR+GrQvv+WGes+f
reanno::psRCH2:GFF1089 100 RYRDSGAFIRGKYWYDFELKDESRLFKDIS----------DSNRKEAAQSSGAQILDAFVYHNYALGDLPGTVRVGRQVVSWGESTF 176
*********************999998664..........499999999************************************** PP
DUF1302 179 vlnGinqinplDvsklrrpGaelkeallPvpmvsaslqltdglsleafyqfeweptrlppvGtFfstsdivgpgaeglllangnaaa 265
++n+in+inplD++++rrpGae+ke l+Pv+m+++s +ltd ls+eafyq ew++t ++++GtFf d+v +g+++ + ++++a a
reanno::psRCH2:GFF1089 177 IGNSINSINPLDAAAFRRPGAEIKEGLIPVNMFYVSQSLTDRLSMEAFYQIEWDQTIADNCGTFFA-VDVVQDGCDTNYHVGNPAIA 262
*****************************************************************7.5788*******999999988 PP
DUF1302 266 l............tgsaagtvvpraadkepsdsgqwGlalrylaeeltefglyylnyhsrlPvls...................... 318
+ + +g ++pra+d++++dsgq+Glalr+l ++ te+g+y++nyhsr+P++s
reanno::psRCH2:GFF1089 263 PlqpvaaafgqgfEVTPEGVILPRAGDRDARDSGQYGLALRWLGDA-TEYGAYFMNYHSRTPNVStqtaglataaqlgniigtaesi 348
8************88899************************5555.**************************************** PP
DUF1302 319 ......gasaavdadnaayfleYpediklyGaSfnttlgg.gtavagEvsYrpdaplqvntadllaaalaptaplpl.......eyv 391
g +++v n++y+leYpedi+lyG+Sf+ttl gta++gE+sYrp+ap+q+nt+d++ a l+p ap + +++
reanno::psRCH2:GFF1089 349 apgsgaGLASSVMLGNGSYYLEYPEDIQLYGLSFSTTL-PtGTAWSGEISYRPNAPVQLNTQDVTRALLNPIAPGTSpiessfgAEN 434
******8899999*************************.77****************************99999999********** PP
DUF1302 392 rgyergdvlqaqlg........lgadsltlvaEvavthvpdlpdde..........gsdsaagnaagcaadgyatrfswGyrlvlel 460
rgy r++++q+q + lga +t+v+E+++ hv +l++++ gs + + a + + g++t +swGyrl+ +
reanno::psRCH2:GFF1089 435 RGYNRKEITQIQTTfthffdqvLGAGRVTVVGEIGYAHVGGLESTSelrygrdaiyGSVDDPTALARYGRHGFVTANSWGYRLRTIA 521
******************9999999*********************888888877666666666669******************** PP
DUF1302 461 tyndvlpgldlspsisfshdvkGnspdagfveGrkavslgltfdylsnwkvdlgytaffggddqnalrDrDfvslsvkysF 541
+yn+v++g++l+p++sfshdv+G++p++ f eG kavs+gl+++y+++++++l+yt ffggd+ n+l DrDf+++sv+ +F
reanno::psRCH2:GFF1089 522 DYNNVFAGINLKPNLSFSHDVDGYGPNGLFNEGSKAVSIGLDAEYQNTYTASLSYTDFFGGDY-NTLVDRDFLAFSVGVNF 601
*****************************99*******************************7.9**************99 PP
Or compare reanno::psRCH2:GFF1089 to CDD or PaperBLAST