PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS1303672 to PF00697 (PRAI)

VIMSS1303672 has 206 amino acids

Query:       PRAI  [M=193]
Accession:   PF00697.26
Description: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-44  138.1   0.0    1.7e-44  137.9   0.0    1.0  1  VIMSS1303672  


Domain annotation for each sequence (and alignments):
>> VIMSS1303672  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.9   0.0   1.7e-44   1.7e-44       1     192 [.       3     197 ..       3     198 .. 0.94

  Alignments for each domain:
  == domain 1  score: 137.9 bits;  conditional E-value: 1.7e-44
          PRAI   1 akicgltrasdvkkavkagadylglifsesskrevseesaqellekvpae...lVgVfvNqpieevlrlakelgLdvvQLHGde.dqeyenllktel 93 
                   +kicg+t+++d+  a+  gady+g+if+e+skr+ s   a+ +++ +++     VgVfv+q+ +++ ++ ++ g++ vQLH +  +  +e+ll+ + 
  VIMSS1303672   3 VKICGVTHPEDAEYAALLGADYIGMIFAEKSKRKTSLSMAKSITNTTKRLgaePVGVFVEQTTDQIIAICEQTGIKTVQLHNSFpSGSLEKLLR-DY 98 
                   59*****************************************99998655779******************************6666666666.** PP

          PRAI  94 pvikalkvaesvdevkearradnvdlvLlDseaGGtGelldwslvskllkskkvilAGGLspeNvseaikllgvlgvDvssGVEtn..GvkDlekik 188
                   ++i a++v e+ d+ ++ +   + +++L D+e+GGtG++++w+ +s+ ++ +  +lAGGL+p N++eai +l++ gvDv+ GVE      kD +++k
  VIMSS1303672  99 SIIYAISVRENGDVCHPQSLPPK-VIPLYDTEKGGTGKQFNWKAFSSPRD-TFWMLAGGLNPANIEEAIATLHPNGVDVATGVEFPnkTRKDPDLLK 193
                   **********9999899888888.9************************6.*********************************754699******* PP

          PRAI 189 kfvq 192
                   +f+q
  VIMSS1303672 194 AFIQ 197
                   **98 PP



Or compare VIMSS1303672 to CDD or PaperBLAST