PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2018479 to PF00697 (PRAI)

VIMSS2018479 has 199 amino acids

Query:       PRAI  [M=193]
Accession:   PF00697.26
Description: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.5e-50  155.1   0.1    1.1e-49  154.9   0.1    1.0  1  VIMSS2018479  


Domain annotation for each sequence (and alignments):
>> VIMSS2018479  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.9   0.1   1.1e-49   1.1e-49       1     192 [.       4     189 ..       4     190 .. 0.96

  Alignments for each domain:
  == domain 1  score: 154.9 bits;  conditional E-value: 1.1e-49
          PRAI   1 akicgltrasdvkkavkagadylglifsesskrevseesaqellekvpae..lVgVfvNqpieevlrlakelgLdvvQLHGdedqeyenllktelpv 95 
                   +kicgl++++ v +av+agady+g++f++s kr+v+ e+a+el + +pa    VgVfv  +  e l+ ++++gLd+vQ+HG+ ++++ + l+  +  
  VIMSS2018479   4 VKICGLSTKEAVETAVSAGADYIGFVFAPS-KRQVTLEEAAELAKLIPADvkKVGVFVSPSRVELLEAIDKVGLDLVQVHGQVADDLFENLP--CAS 97 
                   59**************************99.**************99966669******************************9999999**..99* PP

          PRAI  96 ikalkvaesvdevkearradnvdlvLlDseaGGtGelldwslvskllkskkvilAGGLspeNvseaikllgvlgvDvssGVEtnGvkDlekikkfvq 192
                   i+a++v+        + + ++ d +L+D   +G+G+ +dw  + +   ++++++AGGL+ +Nv++ai+   +++vDvssGVEt+G+kD eki++f++
  VIMSS2018479  98 IQAVQVDG----NGHVPNSQA-DYLLFDAPVAGSGQPFDWGQLDTTGLAQPFFIAGGLNEDNVVKAIQHFTPYAVDVSSGVETDGQKDHEKIRRFIE 189
                   *****999....788888888.99***********************************************************************97 PP



Or compare VIMSS2018479 to CDD or PaperBLAST