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Align NP_060945.2 to PF01169 (UPF0016)

NP_060945.2 has 324 amino acids

Query:       UPF0016  [M=75]
Accession:   PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    5.7e-50  153.9  19.1      1e-29   89.0   3.6    2.2  2  NP_060945.2  


Domain annotation for each sequence (and alignments):
>> NP_060945.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.9   7.7   4.8e-24   4.8e-24       2      75 .]      99     171 ..      98     171 .. 0.97
   2 !   89.0   3.6     1e-29     1e-29       2      75 .]     239     312 ..     238     312 .. 0.98

  Alignments for each domain:
  == domain 1  score: 70.9 bits;  conditional E-value: 4.8e-24
      UPF0016   2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75 
                  +++++i+++ElGDkT+++++++A+ry+ l+V++Ga+lAl l+t l+vl+G +  + +p+ ++ +v+ vlF++fG
  NP_060945.2  99 AAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYAT-TVIPRVYTYYVSTVLFAIFG 171
                  7899**********************************************887.99*****************9 PP

  == domain 2  score: 89.0 bits;  conditional E-value: 1e-29
      UPF0016   2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75 
                  ++++l+flaE+GD++ql+ti+LAar++p++V +G t++++l+t+lav++G+++a++++ r+v+++++++Fl+f+
  NP_060945.2 239 QALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFA 312
                  899*********************************************************************97 PP



Or compare NP_060945.2 to CDD or PaperBLAST