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Align VIMSS200253 to PF01169 (UPF0016)

VIMSS200253 has 197 amino acids

Query:       UPF0016  [M=75]
Accession:   PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.9e-47  144.5  18.8    3.1e-28   84.3   5.6    2.1  2  VIMSS200253  


Domain annotation for each sequence (and alignments):
>> VIMSS200253  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.5   5.2   1.1e-22   1.1e-22       2      75 .]      19      93 ..      18      93 .. 0.97
   2 !   84.3   5.6   3.1e-28   3.1e-28       2      75 .]     117     191 ..     116     191 .. 0.96

  Alignments for each domain:
  == domain 1  score: 66.5 bits;  conditional E-value: 1.1e-22
      UPF0016  2 tsflliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
                 +s++++++aE+GDkTql++++LAar+ +  a++lG++l ++++++ a++lG++  +++++++ ++++a++F++++
  VIMSS200253 19 ASTFTVAIAEIGDKTQLLALLLAARFkNKTAIILGIFLSTLFNHFAAAWLGQWAINWVNPDVARYLVAASFFAIA 93
                 7899**********************99999*****************************************986 PP

  == domain 2  score: 84.3 bits;  conditional E-value: 3.1e-28
      UPF0016   2 tsflliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75 
                  ++f+l+f+aE+GDkTq+at++L+a+y  + +V++G+t++++la+++ v++G++ a++lp++++++  a+lF+++G
  VIMSS200253 117 ATFILFFIAEMGDKTQIATVVLSAKYdALAMVVAGTTIGMLLANVPVVIAGHFSAEKLPMKWIHRGCAILFALLG 191
                  79************************66666*****************************************998 PP



Or compare VIMSS200253 to CDD or PaperBLAST