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Align XP_028886566.1 to PF01169 (UPF0016)

XP_028886566.1 has 260 amino acids

Query:       UPF0016  [M=75]
Accession:   PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.7e-50  153.9  23.9    2.2e-29   88.0   5.5    2.1  2  XP_028886566.1  


Domain annotation for each sequence (and alignments):
>> XP_028886566.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   72.1  10.4     2e-24     2e-24       2      75 .]      15      88 ..      14      88 .. 0.98
   2 !   88.0   5.5   2.2e-29   2.2e-29       2      75 .]     164     237 ..     163     237 .. 0.98

  Alignments for each domain:
  == domain 1  score: 72.1 bits;  conditional E-value: 2e-24
         UPF0016  2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
                    +sf++i+++E+GDkT++++ ++A+r++   Vf+Ga+ Ala++t+l++l+G ++ + l+ r+++++a+vlFl+fG
  XP_028886566.1 15 ASFSMILVSEIGDKTFFIACLMAMRHSKALVFFGAIGALATMTVLSALMGVVVPNVLSVRVTEALAVVLFLFFG 88
                    79************************9999*******************************************9 PP

  == domain 2  score: 88.0 bits;  conditional E-value: 2.2e-29
         UPF0016   2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75 
                     ++f+l+f+aE+GD++qlatiaLAa ++p+aV+lG ++++al+t+ avl+G+l+a+++++r+v++v++vlF++f+
  XP_028886566.1 164 EAFTLTFVAEWGDRSQLATIALAAAKNPYAVTLGGVMGHALCTGGAVLFGNLIAQYVSMRTVNIVGGVLFILFA 237
                     79**********************************************************************97 PP



Or compare XP_028886566.1 to CDD or PaperBLAST