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Align NP_649471.3 to PF01170 (UPF0020)

NP_649471.3 has 488 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.2e-17   47.8   0.0    1.7e-15   43.3   0.0    2.8  2  NP_649471.3  


Domain annotation for each sequence (and alignments):
>> NP_649471.3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   1.7e-15   1.7e-15       3     139 ..     189     318 ..     188     325 .. 0.77
   2 ?   -0.6   0.0     0.049     0.049     137     166 ..     341     370 ..     338     376 .. 0.87

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 1.7e-15
      UPF0020   3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaeka 99 
                   R+f g++++ ++L+  + + a +++g+  +DP+ G+G++l+ aa  g ++    +   ++++++      r  ++     ++d+      r N++++
  NP_649471.3 189 HRKFIGNTSMDAQLSLLMANQAMVRNGDLVFDPFVGTGSLLVSAAKWGGYVLGADIDYMMVHARC------RpSRITQKVREKDE----SIRANLKQY 276
                  699************************************************94333222222333......22222222334444....4599***** PP

      UPF0020 100 gvgdl.iefsqadaakLr.lkegevdvivtnpPYGerlgskk 139
                  g +d+ +++++ad+ +   +++ ++d i+t+pPYG+r  ++k
  NP_649471.3 277 GCADRyMDVVVADFSNPVwHSRISFDCIITDPPYGIREATEK 318
                  99886368899998875556888*************977765 PP

  == domain 2  score: -0.6 bits;  conditional E-value: 0.049
      UPF0020 137 skkalekLYseflrelkrvlrgggrlvllt 166
                  s+ +l++LY  +l+  +r+l+ ggrlv  +
  NP_649471.3 341 SHYSLQSLYGDLLEFSARHLKLGGRLVCWI 370
                  677899*******************99765 PP



Or compare NP_649471.3 to CDD or PaperBLAST