Q9CZB3 has 528 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-30 92.6 0.2 7.6e-30 90.2 0.0 2.2 2 Q9CZB3
Domain annotation for each sequence (and alignments):
>> Q9CZB3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.8 0.0 0.12 0.12 106 127 .. 124 145 .. 120 213 .. 0.78
2 ! 90.2 0.0 7.6e-30 7.6e-30 4 170 .. 274 412 .. 272 424 .. 0.94
Alignments for each domain:
== domain 1 score: -1.8 bits; conditional E-value: 0.12
UPF0020 106 efsqadaakLrlkegevdvivt 127
++sq da L++k ge+++i++
Q9CZB3 124 KVSQRDANPLKRKAGENETIIA 145
5667777777777777777775 PP
== domain 2 score: 90.2 bits; conditional E-value: 7.6e-30
UPF0020 4 RvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdli 105
R + + a L++t+A a+ +a++k+g lDPmCG Gtil+Eaa + ++ +g+D+ + + ga +N+++ag++d+i
Q9CZB3 274 RTYIQTAGLRSTIAWAMASIAEIKAGALVLDPMCGLGTILVEAAEEWPDVF------------------------YMGADMSDAQLLGACDNLKAAGLTDRI 351
788899*********************************************........................79************************* PP
UPF0020 106 efsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenk 170
e+ + +++L+l++++ dvi+++ P+G++ + k+++ ++l+e++rvlr gg +vll++e+
Q9CZB3 352 ELLKSSVTDLPLPSQSTDVIISDIPFGKKFKLGKDIK----SILQEMERVLRVGGAMVLLLSEDH 412
*******************************999986....68999********99999999864 PP
Or compare Q9CZB3 to CDD or PaperBLAST