REBASE::M.AspNIH5II has 495 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.2e-13 34.4 0.0 2e-12 33.3 0.0 1.6 1 REBASE::M.AspNIH5II Domain annotation for each sequence (and alignments): >> REBASE::M.AspNIH5II # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.3 0.0 2e-12 2e-12 18 134 .. 173 280 .. 169 337 .. 0.75 Alignments for each domain: == domain 1 score: 33.3 bits; conditional E-value: 2e-12 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdlie 106 + +v++ + k ge+++DP CG+G++l a +++ + e ++ + ++++ g+++++ + +N g++ ++ REBASE::M.AspNIH5II 173 RFMVNRIDPKLGERIMDPACGTGGFLACAFDHVKEHY------------VETSNDHQtLQQQILGVEKKQLPHLLCTTNMLLHGIEVPVQ 250 679***********************55444444444............2333344425666********99999*************** PP UPF0020 107 fsqadaakLr..lkegevdvivtnpPYGer 134 ++ + + + ++++dvi+tnpP+G REBASE::M.AspNIH5II 251 IRHGNTLDKPlsSWDSDIDVILTNPPFGGT 280 ***99987664466679***********64 PP
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