REBASE::M.Fco1691I has 756 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-16 44.9 0.0 2.2e-15 43.0 0.0 2.0 1 REBASE::M.Fco1691I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Fco1691I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 43.0 0.0 2.2e-15 2.2e-15 20 137 .. 319 475 .. 313 481 .. 0.79
Alignments for each domain:
== domain 1 score: 43.0 bits; conditional E-value: 2.2e-15
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye...............................lkaeaeeear..... 74
+v++ + ++ge + DP CGsG++lI a ++ + ++e++ l +e+ ++
REBASE::M.Fco1691I 319 MVEILDPQEGEIICDPCCGSGGFLIKAFEYVRAKIEAEIQEQKEIikrkyfndeytnstdkkkleieekvnqlffyLNQELDINNPksrlr 409
99999*********************9887777776666555544668999****************999999998444443333343342 PP
UPF0020 75 .aelk...lygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYGerlgs 137
+ ++g D ++r+ ++a+ N g g+ + +++ e+ +dvi+tnpP+G r+++
REBASE::M.Fco1691I 410 aL--SydcIFGTDANPRMSRTAKMNMIMHGDGHGGVHHNDGLLNVNgIFENRFDVILTNPPFGARIEK 475
33..2559*****************998887766555555566666655679**************86 PP
Or compare REBASE::M.Fco1691I to CDD or PaperBLAST