REBASE::M.Kae363I has 539 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-11 31.0 0.0 2.5e-11 29.8 0.0 1.6 1 REBASE::M.Kae363I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Kae363I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.8 0.0 2.5e-11 2.5e-11 18 176 .. 167 331 .. 163 346 .. 0.78
Alignments for each domain:
== domain 1 score: 29.8 bits; conditional E-value: 2.5e-11
UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvg..dlief 107
++vr + ++ge+++DP G+ ++lI a + ++ ++ y l a+a++ +++ ++g++l ++ + a N g++ d+ +
REBASE::M.Kae363I 167 NSMVRCIKPQPGEVIQDPAAGTAGFLIAADQYIKQQT-----DNLYDLTAKARTF-QKNKAFVGVELVPSTRRLALMNCLLHGMEgdDEGVV 252
68*************************8887777777.....4555554444432.24445*****************88888761155667 PP
UPF0020 108 sqadaakLr.lkegevdvivtnpPYGerlgskkal..ekL.Ys......eflrelkrvlrgggrlvlltaenkalekal 176
q +a + + + d+i++npP+G + g + ++ ++L Y+ +fl+ + r+l+ ggr+++++++n +e+ +
REBASE::M.Kae363I 253 HQGNALGMAgAGLPKADIILANPPFGTAKGGEASItrDDLtYPtsnkqlAFLQHIYRNLKPGGRAAVVLPDNVLFEAGV 331
7788888876444489************9999888666773434444447999999**************999998755 PP
Or compare REBASE::M.Kae363I to CDD or PaperBLAST