REBASE::M.Mmo172I has 490 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.6e-13 35.4 0.0 9.7e-13 34.3 0.0 1.5 1 REBASE::M.Mmo172I Domain annotation for each sequence (and alignments): >> REBASE::M.Mmo172I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.3 0.0 9.7e-13 9.7e-13 18 134 .. 172 279 .. 168 342 .. 0.74 Alignments for each domain: == domain 1 score: 34.3 bits; conditional E-value: 9.7e-13 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsq 109 + +v++ + k ge+++DP CG+G++l a +++ + ++ e ++ + +++g+++++ + +N g++ ++++ REBASE::M.Mmo172I 172 RFMVNRIDPKLGESIMDPACGTGGFLACAFDHVKEHY-----------VNTTEDHKILQKQICGVEKKQLPHLLCTTNMLLHGIEVPVQIRH 252 679***********************55544444444...........2333444446667*******999999999999999999999988 PP UPF0020 110 ada..akLrlkegevdvivtnpPYGer 134 + + L ++++dvivtnpP+G REBASE::M.Mmo172I 253 DNTlnKPLSSWDEQIDVIVTNPPFGGT 279 66511456677779***********54 PP
Or compare REBASE::M.Mmo172I to CDD or PaperBLAST