REBASE::M.Mva1261III has 518 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.3e-12 32.2 0.0 7.5e-12 31.5 0.0 1.4 1 REBASE::M.Mva1261III Domain annotation for each sequence (and alignments): >> REBASE::M.Mva1261III # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.5 0.0 7.5e-12 7.5e-12 20 140 .. 173 307 .. 168 371 .. 0.78 Alignments for each domain: == domain 1 score: 31.5 bits; conditional E-value: 7.5e-12 UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye.............lkaeaeeearaelklygsDldrrvvqgareN 95 +v++++ +++e+ DP CG+ ++l + + n+ + f + l++e + +++ e ++g+D+d+ +++ + N REBASE::M.Mva1261III 173 IVEMTEPQPTETVCDPACGTAGFLA-RTMEYLNRTHSSE--FG-KftdddgnmiysgdLLEEYRSHIN-EKMFWGFDFDSTMLRVSSMN 256 799*****************99985.5566666664332..33.246789999988876666666555.445***************** PP UPF0020 96 aekagvgd.liefsqadaakLr.....lkegevdvivtnpPYGerlgskka 140 gv++ i +++ ++++ ++e+ +dvi++npP+ +l++ + REBASE::M.Mva1261III 257 MLLHGVSGaNILYQDSLNKSILdrypaQAENFFDVILANPPFKGSLDESNI 307 *9999976257788777777656888777889**********999988765 PP
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