REBASE::M.PaeLWI has 524 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.4e-12 33.0 0.0 4.8e-12 32.1 0.0 1.5 1 REBASE::M.PaeLWI Domain annotation for each sequence (and alignments): >> REBASE::M.PaeLWI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.1 0.0 4.8e-12 4.8e-12 18 141 .. 179 316 .. 174 371 .. 0.84 Alignments for each domain: == domain 1 score: 32.1 bits; conditional E-value: 4.8e-12 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye..........lkaeaeeearaelklygsDldrrvvqgareNaekag 100 a+++l ++++++ DP CG+ ++l + + n+++ +++ l e ++ + + ++g+D+d +++ + N g REBASE::M.PaeLWI 179 DAMIELIAPQPTDVICDPACGTAGFLA-RTMEYLNRVHSSPEGTFSDedgnlhysgdL-LEPYRQHINSQMFWGFDFDTTMLRVSSMNMMLHG 269 599**********************85.677777888655555554488889887743.333344445667********************** PP UPF0020 101 vgd.liefsqadaakLr.....lkegevdvivtnpPYGerlgskkal 141 v++ i +++ ++++ ++++ +dv+++npP+ +l++++++ REBASE::M.PaeLWI 270 VNGaNIRYQDSLSKSIKehyprQEQNFFDVVLANPPFKGSLDETNTN 316 976379**********999886555689*********9999998776 PP
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