REBASE::M.RbaNRL2II has 512 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-12 33.2 0.2 6.5e-11 28.4 0.2 2.5 1 REBASE::M.RbaNRL2II
Domain annotation for each sequence (and alignments):
>> REBASE::M.RbaNRL2II
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.4 0.2 6.5e-11 6.5e-11 15 54 .. 196 235 .. 194 307 .. 0.75
Alignments for each domain:
== domain 1 score: 28.4 bits; conditional E-value: 6.5e-11
UPF0020 15 tLAaalvrlagwkdgepllDPmCGsGtilIEaallgania 54
++A++l r+a ++g+++ DP CGsG++lI aa + ++
REBASE::M.RbaNRL2II 196 QVARVLARIAAPQPGDRICDPACGSGSLLIKAAEEVGSRD 235
579*****************************98766554 PP
Or compare REBASE::M.RbaNRL2II to CDD or PaperBLAST