REBASE::M.Rsp34AI has 484 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.9e-15 40.9 0.0 1.8e-14 40.0 0.0 1.3 1 REBASE::M.Rsp34AI
Domain annotation for each sequence (and alignments):
>> REBASE::M.Rsp34AI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.0 0.0 1.8e-14 1.8e-14 19 134 .. 156 261 .. 153 266 .. 0.86
Alignments for each domain:
== domain 1 score: 40.0 bits; conditional E-value: 1.8e-14
UPF0020 19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqa 110
a+v++ + k+ ++ DP CG+ ++l+ aa+ + p++ + vy + + k+ g+D+ ++vv+ a N+ g+++ ++++a
REBASE::M.Rsp34AI 156 AMVEVVDPKPHQTVHDPACGTAGFLL-AAWEHMKKHPKARDRAVYSA---------LKNKFSGADIVPEVVRLAAMNLYLHGITGVESIVEA 237
9************************9.88888888874433333332.........234599****************************** PP
UPF0020 111 daakLrlkegevdvivtnpPYGer 134
+ a L + +dv+++npP+G++
REBASE::M.Rsp34AI 238 KDALLGAGGRTYDVVLANPPFGKK 261
***99977779***********96 PP
Or compare REBASE::M.Rsp34AI to CDD or PaperBLAST