REBASE::M.Sma36365I has 544 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-11 30.8 0.0 8.5e-11 28.0 0.0 2.3 2 REBASE::M.Sma36365I Domain annotation for each sequence (and alignments): >> REBASE::M.Sma36365I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.5 0.0 0.095 0.095 65 87 .. 40 62 .. 12 68 .. 0.78 2 ! 28.0 0.0 8.5e-11 8.5e-11 20 139 .. 174 317 .. 168 344 .. 0.72 Alignments for each domain: == domain 1 score: -1.5 bits; conditional E-value: 0.095 UPF0020 65 lkaeaeeearaelklygsDldrr 87 ++++ e++ +++ +++g+D+++r REBASE::M.Sma36365I 40 MLDTQEQRDEKRKQIAGVDFKPR 62 67777888889999*****9887 PP == domain 2 score: 28.0 bits; conditional E-value: 8.5e-11 UPF0020 20 lvrlag..wkdgepllDPmCGsGtilI...Eaallganiapgllrefvye..............lkaeaeeearaelklygsDldrrvvq 90 +v++ + +ge++ DP CG+G++l E l + + + e ++ l++ ++ + ++ + g D+d +++ REBASE::M.Sma36365I 174 MVEMMEpnPARGETICDPACGTGGFLAtsyEYLLEKYSSLESIHTEIGTNergeleeqkiftgdLLTPWRDH-VDNNMFHGYDFDTTMLR 262 665554114579*************95333555555555544444444446666666666555433333322.244459*********** PP UPF0020 91 gareNaekagvgdl.iefsqadaakLr.....lkegevdvivtnpPYGerlgskk 139 a N+ gv++ i++++ +++ ++++ +++i++npP+ +l+++ REBASE::M.Sma36365I 263 IAAMNLIMHGVEEPdIHYQDTMSQSFStnfpqASKNAFNLILANPPFTGSLDEED 317 ***********98549999888887777776877889***********9999876 PP
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