REBASE::M.Ssp714I has 477 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-15 43.1 0.0 4.3e-15 42.0 0.0 1.5 1 REBASE::M.Ssp714I
Domain annotation for each sequence (and alignments):
>> REBASE::M.Ssp714I
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 42.0 0.0 4.3e-15 4.3e-15 20 148 .. 143 265 .. 137 319 .. 0.82
Alignments for each domain:
== domain 1 score: 42.0 bits; conditional E-value: 4.3e-15
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeear.aelklygsDldrrvvqgareNaekagvgdl.iefsq 109
+v++ + +g+ + DP CG+G++l+ a +a+ ++ +e++ + ++ + g+D+d+ +++ + N gv++ i +++
REBASE::M.Ssp714I 143 MVEMMEPSPGDEICDPACGTGGFLVGSAEYVAREHDS--------ALYDVEQRRHfNNSMFHGFDFDSTMLRIGSMNMLLHGVEQPdIRYRD 226
99************************99888887743........446666666657777***********************985499999 PP
UPF0020 110 adaakLrlkegevdvivtnpPYGerlgskkalekLYsef 148
+ ++++++ +i++npP+ +l+ + + ++L + +
REBASE::M.Ssp714I 227 SLSESAGEEQDSYSLILANPPFAGSLDYETTSKDLLKVV 265
88888889999****************999999987754 PP
Or compare REBASE::M.Ssp714I to CDD or PaperBLAST