REBASE::M.Van425I has 519 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9.3e-13 34.4 0.0 2.1e-12 33.2 0.0 1.5 1 REBASE::M.Van425I Domain annotation for each sequence (and alignments): >> REBASE::M.Van425I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.2 0.0 2.1e-12 2.1e-12 18 135 .. 163 298 .. 159 306 .. 0.77 Alignments for each domain: == domain 1 score: 33.2 bits; conditional E-value: 2.1e-12 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye...........lkaeaeeear...aelklygsDldrrvvqgareN 95 a++ + ++ +++lDP CG+G++ + a+ ++ + + + +++ +k+++++++ ++ ++g ++ ++ + + N REBASE::M.Van425I 163 DAMLACVRPEPKKTILDPACGTGGFFLSACDWITYGDTQWIEKGMSHwnpakdnsstiAKSKLNKDQVkflRDNTFFGNEIVPSTRRMCLMN 254 5999999***********************9888888666666666699999**999966666666664547777***************99 PP UPF0020 96 aekagvg...dliefsqada..akLrlkegevdvivtnpPYGerl 135 + ++g ++ +++ ada + L+ e++vd +++npP+G++ REBASE::M.Van425I 255 LFLHNIGsidGEPKVERADAllTPLK-GEDKVDYVLANPPFGKKS 298 86655541114455555555116666.899************975 PP
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