REBASE::M2.Mma5219I has 499 amino acids
Query: UPF0020 [M=197] Accession: PF01170.22 Description: Putative RNA methylase family UPF0020 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-13 35.3 0.0 2e-12 33.3 0.0 1.9 2 REBASE::M2.Mma5219I Domain annotation for each sequence (and alignments): >> REBASE::M2.Mma5219I # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.3 0.0 2e-12 2e-12 18 133 .. 182 284 .. 176 288 .. 0.83 2 ? -2.5 0.0 0.19 0.19 88 116 .. 401 428 .. 350 461 .. 0.59 Alignments for each domain: == domain 1 score: 33.3 bits; conditional E-value: 2e-12 UPF0020 18 aalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdlief 107 + + + + k ge+++DP CGsG++l+ aall+++ ++ +++klyg +++ + ar N g +d+ + REBASE::M2.Mma5219I 182 RLMSLIVDPKSGESIYDPTCGSGGMLLNAALLAKEKG-----------------QEYRNIKLYGQEINIITSAIARMNMFLHGFEDFYVI 254 567778899************************9999.................4557899*************************9988 PP UPF0020 108 sqadaakLr....lkegevdvivtnpPYGe 133 + + + +++d++++npPY + REBASE::M2.Mma5219I 255 RGDTLSNPAfvedDRVKKFDIVIANPPYSI 284 864433322444545559**********65 PP == domain 2 score: -2.5 bits; conditional E-value: 0.19 UPF0020 88 vvqgareNaekagvgdliefsqadaakLr 116 +++++ ++e+ ++++ ++ d+++++ REBASE::M2.Mma5219I 401 SINTTQAKLESEHIDKI-HAAYSDFKSIE 428 34444444444444332.33333544444 PP
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