SwissProt::Q03055 has 408 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-15 42.6 0.3 3.1e-14 39.2 0.3 2.2 1 SwissProt::Q03055
Domain annotation for each sequence (and alignments):
>> SwissProt::Q03055
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 39.2 0.3 3.1e-14 3.1e-14 29 139 .. 140 228 .. 137 244 .. 0.87
Alignments for each domain:
== domain 1 score: 39.2 bits; conditional E-value: 3.1e-14
UPF0020 29 gepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lke 119
+ ++ DP CG+G +lIEa g + ++yg D+d+ +++ +r+ +++ + + ++++ d+ + + e
SwissProt::Q03055 140 ELTFCDPCCGTGNFLIEAVKRGFKPC-----------------------NIYGYDIDEVALEISRSRLKELCGVAESNIEKRDFLSASyQIE 208
5689**************99999999.......................59******************99887777888888877776688 PP
UPF0020 120 gevdvivtnpPYGerlgskk 139
+++dvi tnpP+G++l +k
SwissProt::Q03055 209 QKYDVIFTNPPWGKKLPKKD 228
89************997764 PP
Or compare SwissProt::Q03055 to CDD or PaperBLAST