VIMSS2232773 has 495 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-12 32.1 0.0 2.5e-11 29.7 0.0 2.1 2 VIMSS2232773
Domain annotation for each sequence (and alignments):
>> VIMSS2232773
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.8 0.0 0.49 0.49 141 154 .. 159 172 .. 156 178 .. 0.77
2 ! 29.7 0.0 2.5e-11 2.5e-11 20 133 .. 190 294 .. 186 303 .. 0.79
Alignments for each domain:
== domain 1 score: -3.8 bits; conditional E-value: 0.49
UPF0020 141 lekLYseflrelkr 154
+ +LY+++lre+
VIMSS2232773 159 MAHLYESMLREMRD 172
56899999999976 PP
== domain 2 score: 29.7 bits; conditional E-value: 2.5e-11
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelk.lygsDldrrvvqgareNaekagvgdl.iefsqadaak 114
+v+ + + ge++lDP CG+G++l+Ea + + ++ ra + l+g+++++ + N+ gvg+ i+ +a a +
VIMSS2232773 190 IVQQVDPRLGEVILDPACGTGGFLVEALE-HLSPK------------VTTTAQLRALHEnLRGIEKKPLPFLLGMMNLVLHGVGQPnITRGNALAES 273
678888999*****************843.33333............23445555444459**********************98538888999999 PP
UPF0020 115 Lr..lkegevdvivtnpPYGe 133
++ k vdvi+tnpP+G
VIMSS2232773 274 ITqiSKARRVDVILTNPPFGG 294
987656669**********95 PP
Or compare VIMSS2232773 to CDD or PaperBLAST