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Align VIMSS270088 to PF01170 (UPF0020)

VIMSS270088 has 384 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-58  183.2   0.0    3.3e-58  182.7   0.0    1.2  1  VIMSS270088  


Domain annotation for each sequence (and alignments):
>> VIMSS270088  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  182.7   0.0   3.3e-58   3.3e-58       1     195 [.     167     371 ..     167     373 .. 0.97

  Alignments for each domain:
  == domain 1  score: 182.7 bits;  conditional E-value: 3.3e-58
      UPF0020   1 RgyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye............lkaeaeeearaelk..lygsDl 84 
                  RgyRv +g+ap+ke++Aaa++ l++w +++pl+DP CGsGt+ IEaal+g niapg++r+f++e            +++ ae+ea++e++  + g+D+
  VIMSS270088 167 RGYRVQKGGAPIKENMAAAILALSNWFPDKPLVDPTCGSGTFCIEAALIGMNIAPGFNRSFAFEewswvdkdmvqqVRDDAEQEANYEIEldISGFDI 264
                  9*************************************************************************************777777****** PP

      UPF0020  85 drrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekaleeralr 182
                  d r+++ a++Nae+ag++d i+f+q+  +++r +++ ++v+++npPYGerl + ka++ LY+e++++++  l++  ++ +++++++ +e  ++++a +
  VIMSS270088 265 DGRMIEIAKSNAEEAGLSDVITFKQMRLQDFR-TDKVNGVVISNPPYGERLLDDKAVDILYNEMGQTFAP-LKT--WSKFILTSDELFELKYGQKADK 358
                  ********************************.77789********************************.999..********************** PP

      UPF0020 183 kvkeknvklglll 195
                  k+k++n+ l+ +l
  VIMSS270088 359 KRKLYNGTLKVDL 371
                  *******998765 PP



Or compare VIMSS270088 to CDD or PaperBLAST