VIMSS3782914 has 775 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.5e-14 38.4 0.0 1.2e-13 37.3 0.0 1.4 1 VIMSS3782914
Domain annotation for each sequence (and alignments):
>> VIMSS3782914
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.3 0.0 1.2e-13 1.2e-13 20 140 .. 276 427 .. 271 435 .. 0.79
Alignments for each domain:
== domain 1 score: 37.3 bits; conditional E-value: 1.2e-13
UPF0020 20 lvrlagwkdgepllDPmCGsGtilIEaallganiapgll.refvye...........................lkaeaeeear..aelklygsDldr 86
+v + ++k++e + DP GsG++lI a ++++ + ++ r ++ + l ++ + e++ + +++g D ++
VIMSS3782914 276 MVDVLDIKQNELICDPCAGSGGFLIRAFEIVKDKIDEKYiRLKKLKqrevfgenleniddeklkakyeqvineLNEKQKLEIQylSKSSIFGTDANP 372
889999*********************998887775544155555599999**************999977763333333333336666******** PP
UPF0020 87 rvvqgareNaekagvgdl.iefsqadaakLr.lkegevdvivtnpPYGerlgskka 140
r+ + ++ N g g+ i+ ++ +++ ++ +dvi+tnpP+G lg+ ++
VIMSS3782914 373 RMARVSKMNMIMHGDGHNgIHHND-GLLNVNgIFRNRFDVILTNPPFGTNLGKDNS 427
*********999988876255544.555566644558**************98765 PP
Or compare VIMSS3782914 to CDD or PaperBLAST