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Align VIMSS852169 to PF01170 (UPF0020)

VIMSS852169 has 484 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.5e-13   34.9   0.0    1.2e-12   34.0   0.0    1.4  1  VIMSS852169  


Domain annotation for each sequence (and alignments):
>> VIMSS852169  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.0   0.0   1.2e-12   1.2e-12      19     146 ..     170     290 ..     165     347 .. 0.76

  Alignments for each domain:
  == domain 1  score: 34.0 bits;  conditional E-value: 1.2e-12
      UPF0020  19 alvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgd.liefsqadaakL 115
                   +v+l + ++++ ++DP  Gs ++l+ a+   ++    l      +l + ++e++++   +yg+D+dr +++ +  N    g+++  ie+++    + 
  VIMSS852169 170 MMVELMKPTPEDIIVDPAAGSAGFLVAAGEYLRKHRSDL------FLVQSLKEHFNN-HMFYGFDMDRTMLRIGAMNMMLHGIENpNIEYRDSLSEQN 260
                  69***************************9998888544......466777776665.459**********************983599999888887 PP

      UPF0020 116 rlkegevdvivtnpPYGerlgskkalekLYs 146
                  + +++++ ++++npP+  +l+     ++L +
  VIMSS852169 261 K-DKDKYTLVLANPPFKGSLDYDAVSNDLLK 290
                  7.888***********999987766666654 PP



Or compare VIMSS852169 to CDD or PaperBLAST