WP_023233283.1 has 544 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-11 30.8 0.1 1.6e-10 27.1 0.1 2.5 2 WP_023233283.1
Domain annotation for each sequence (and alignments):
>> WP_023233283.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.2 0.0 0.038 0.038 65 91 .. 40 66 .. 10 86 .. 0.80
2 ! 27.1 0.1 1.6e-10 1.6e-10 20 140 .. 174 318 .. 168 334 .. 0.70
Alignments for each domain:
== domain 1 score: -0.2 bits; conditional E-value: 0.038
UPF0020 65 lkaeaeeearaelklygsDldrrvvqg 91
++++ e++ +++ +++g+D+++r q
WP_023233283.1 40 MLDTQEQRDEKRKQIAGIDFKPRFAQE 66
67777888889999*****99998775 PP
== domain 2 score: 27.1 bits; conditional E-value: 1.6e-10
UPF0020 20 lvrlag..wkdgepllDPmCGsGtilI...Eaallganiapgllrefvye..............lkaeaeeearaelklygsDldrrvvqgareN 95
+v++ + +ge++ DP CG+G++l E l + + + e ++ l+ ++++ ++ + g D+d +++ a N
WP_023233283.1 174 MVEMMEpnPARGETICDPACGTGGFLAtsyEYLLEKYSSLESIHTEIGTNergeleeqkiftgdLLMPWRNHV-DNNMFHGYDFDTTMLRIAAMN 267
665554114579*************953335555555555444444444456656555555544333333322.33449**************** PP
UPF0020 96 aekagvgdl.iefsqadaakLr.....lkegevdvivtnpPYGerlgskka 140
+ gv+ i++++ +++ ++++ +++i++npP+ +l+++
WP_023233283.1 268 LIMHGVEAPdIHYQDTMSQSFSanfpqASKNAFNLILANPPFTGSLDEEDI 318
******97549999888887777776877889***********99998765 PP
Or compare WP_023233283.1 to CDD or PaperBLAST