XP_011531872.1 has 507 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-54 170.5 0.0 2.9e-54 169.9 0.0 1.3 1 XP_011531872.1
Domain annotation for each sequence (and alignments):
>> XP_011531872.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 169.9 0.0 2.9e-54 2.9e-54 2 195 .. 294 476 .. 292 478 .. 0.95
Alignments for each domain:
== domain 1 score: 169.9 bits; conditional E-value: 2.9e-54
UPF0020 2 gyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNa 96
++++f gp++L++tLA++++rl++ + + ++DPmCG+G+i+IE+a+ ++++ +++ ++++ + +++++++++++++++ +
XP_011531872.1 294 NITHF-GPTTLRSTLAYGMLRLCDPLPYDIIVDPMCGTGAIPIEGATEWSDCFHIAG-------------DNNPLAVNRAANNIASLLTKSQIKE 374
55555.5**********************************************7665.............9999999****************** PP
UPF0020 97 ekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgg.grlvlltaenkalekaleer..alrkvkekn 188
k +g i+++q+d+++L+l++g+vd+ivt++P+G+r+gskk++++LY+++lre++rv+ gr+vllt+++k+++kal+ + +rkv ++
XP_011531872.1 375 GKPSWGLPIDAVQWDICNLPLRTGSVDIIVTDLPFGKRMGSKKRNWNLYPACLREMSRVCTPTtGRAVLLTQDTKCFTKALSGMrhVWRKVDTVW 469
************************************************************9988******************99999******** PP
UPF0020 189 vklglll 195
v++g+l+
XP_011531872.1 470 VNVGGLR 476
****987 PP
Or compare XP_011531872.1 to CDD or PaperBLAST