XP_012048035.1 has 475 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-12 31.9 0.0 7.2e-11 28.2 0.0 2.3 1 XP_012048035.1
Domain annotation for each sequence (and alignments):
>> XP_012048035.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.2 0.0 7.2e-11 7.2e-11 3 139 .. 188 310 .. 187 315 .. 0.82
Alignments for each domain:
== domain 1 score: 28.2 bits; conditional E-value: 7.2e-11
UPF0020 3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNae 97
R + g++++ +++ + + a +g+ ++DP+ G+G++l a+ ga+++ + + +++g + + + g + ae
XP_012048035.1 188 TRAYYGNTSMEAQMGFLMANQALPVPGKLIYDPFVGTGSMLYAVAQFGAYVMGSDI----------------DGRQIRGKKKGKGIKPGILRAAE 266
588999**********************************************3222................44456666666666666666778 PP
UPF0020 98 kagvgdl.iefsqadaakLr.lkegevdvivtnpPYGerlgskk 139
+++++d+ +f+ d++ + ++ g +d+i+t+pPYG r g+k+
XP_012048035.1 267 QYRLQDKfLDFYIFDVTRGPiRRGGWIDAIITDPPYGVRAGAKR 310
88887752689999999877557779***************997 PP
Or compare XP_012048035.1 to CDD or PaperBLAST