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Align XP_047299971.1 to PF01170 (UPF0020)

XP_047299971.1 has 186 amino acids

Query:       UPF0020  [M=197]
Accession:   PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.2e-12   33.2   0.2    1.3e-11   30.7   0.2    2.0  1  XP_047299971.1  


Domain annotation for each sequence (and alignments):
>> XP_047299971.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.7   0.2   1.3e-11   1.3e-11      32     144 ..      55     142 ..      25     180 .. 0.74

  Alignments for each domain:
  == domain 1  score: 30.7 bits;  conditional E-value: 1.3e-11
         UPF0020  32 llDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvi 125
                      +D  CG G + I  a+lga                            +g+D+d+ +++  ++Nae+ ++++ i+++q d++ L  ++++++d++
  XP_047299971.1  55 VADLGCGCGVLSIGTAMLGAGLC-------------------------VGFDIDEDALEIFNRNAEEFELTN-IDMVQCDVCLLSnRMSKSFDTV 123
                     55555666666666666665555.........................8********************985.788888*****998999***** PP

         UPF0020 126 vtnpPYGerlgskkalekL 144
                     + npP+G + ++  ++  L
  XP_047299971.1 124 IMNPPFGTKNNKGTDMAFL 142
                     *******987766655444 PP



Or compare XP_047299971.1 to CDD or PaperBLAST