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Align NP_060909.2 to PF01205 (UPF0029)

NP_060909.2 has 320 amino acids

Query:       UPF0029  [M=106]
Accession:   PF01205.23
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.5e-35  106.6   0.0    5.3e-35  106.0   0.0    1.3  1  NP_060909.2  


Domain annotation for each sequence (and alignments):
>> NP_060909.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   0.0   5.3e-35   5.3e-35       1     106 []     182     289 ..     182     289 .. 0.92

  Alignments for each domain:
  == domain 1  score: 106.0 bits;  conditional E-value: 5.3e-35
      UPF0029   1 kkSkFiahaapveseeeakelleelkkehkk..AtHnvyAyrle.g.ed.eierssddgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagg 93 
                  ++S+F+ah+apv  ++++k +l++l +++k   AtHn+yAyr+  + ++   ++++ddgE++  AG ++l+++e  +++nv+vvv+R++GGi+LG+++
  NP_060909.2 182 RRSTFQAHLAPVVCPKQVKMVLSKLYENKKIasATHNIYAYRIYcEdKQtFLQDCEDDGETA--AGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDR 277
                  79*********************9998666578********887554555789*********..********************************** PP

      UPF0029  94 lvrayskaakeal 106
                  + ++++++a+++l
  NP_060909.2 278 F-KHINNCARNIL 289
                  *.*******9875 PP



Or compare NP_060909.2 to CDD or PaperBLAST