PaperBLAST – Find papers about a protein or its homologs

 

Align P32438 to PF01205 (UPF0029)

P32438 has 179 amino acids

Query:       UPF0029  [M=106]
Accession:   PF01205.23
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    4.1e-35  106.3   0.0    5.3e-35  106.0   0.0    1.1  1  P32438    


Domain annotation for each sequence (and alignments):
>> P32438  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.0   0.0   5.3e-35   5.3e-35       2     106 .]       4     102 ..       3     102 .. 0.94

  Alignments for each domain:
  == domain 1  score: 106.0 bits;  conditional E-value: 5.3e-35
  UPF0029   2 kSkFiahaapveseeeakelleelkkehkkAtHnvyAyrlegedeierssddgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvrayskaak 103
              +S+F+a+aap++seeea ++l+++++  ++AtHn yAyr+ g    +r+sddgEp    G+pil+++e+++l+ v+v+v+RyfGG+kLGagglvray  +a+
   P32438   4 RSRFLAKAAPAASEEEALAFLAAHRE--PQATHNAYAYRI-G--PLYRFSDDGEPR-APGRPILHAIEAAGLDRVVVLVVRYFGGVKLGAGGLVRAYGGVAA 99 
              8*********************6665..************.4..4689********.99******************************************9 PP

  UPF0029 104 eal 106
              eal
   P32438 100 EAL 102
              986 PP



Or compare P32438 to CDD or PaperBLAST