VIMSS123140 has 194 amino acids
Query: UPF0029 [M=106]
Accession: PF01205.23
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-38 117.4 0.0 2.7e-38 116.6 0.0 1.4 2 VIMSS123140
Domain annotation for each sequence (and alignments):
>> VIMSS123140
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.6 0.0 2.7e-38 2.7e-38 1 105 [. 15 114 .. 15 115 .. 0.94
2 ? -3.4 0.0 0.57 0.57 60 80 .. 160 180 .. 148 184 .. 0.68
Alignments for each domain:
== domain 1 score: 116.6 bits; conditional E-value: 2.7e-38
UPF0029 1 kkSkFiahaapveseeeakelleelkkehkkAtHnvyAyrlegedeierssddgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvray 98
kkS+F+a a p+e+e +ak++++ ++++ A+Hn++A+r+ g +++r+sddgEpsgtAGkpil ++++++l+ v+vvvtR+fGG++LG+gglvray
VIMSS123140 15 KKSRFLAIAGPIEDELSAKTFIA--ARSDPAANHNCWAWRA-G--QSYRFSDDGEPSGTAGKPILAAIDGQSLDRVAVVVTRWFGGVLLGSGGLVRAY 107
89*********************..5668***********9.5..3589************************************************* PP
UPF0029 99 skaakea 105
+a+ +
VIMSS123140 108 GGTAALC 114
*999866 PP
== domain 2 score: -3.4 bits; conditional E-value: 0.57
UPF0029 60 AGkpilevlekeeltnvlvvv 80
G + +++ +++vl +v
VIMSS123140 160 TGAVLSAEIRQDAVDDVLTLV 180
455566667777777777666 PP
Or compare VIMSS123140 to CDD or PaperBLAST