PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2591 to PF01205 (UPF0029)

VIMSS2591 has 191 amino acids

Query:       UPF0029  [M=106]
Accession:   PF01205.23
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence  Description
    ------- ------ -----    ------- ------ -----   ---- --  --------  -----------
      3e-40  122.8   0.0      4e-40  122.5   0.0    1.2  1  VIMSS2591  


Domain annotation for each sequence (and alignments):
>> VIMSS2591  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.5   0.0     4e-40     4e-40       1     105 [.      17     120 ..      17     121 .. 0.95

  Alignments for each domain:
  == domain 1  score: 122.5 bits;  conditional E-value: 4e-40
    UPF0029   1 kkSkFiahaapveseeeakelleelkkehkkAtHnvyAyrleg.edeierssddgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvrays 99 
                k+S+F+a+++pv++e++++e l+e++k  ++AtHn++Ayr+ + ++  e+ssddgEpsgtAG+pil +l+k +l n+++vvtRyfGG+kLG++gl++ays
  VIMSS2591  17 KRSEFYATIFPVKDEKDFREKLKEVSK--RDATHNCWAYRIFSpNGILEHSSDDGEPSGTAGRPILGALKKYDLMNTAIVVTRYFGGVKLGVRGLIEAYS 114
                79*********************9998..99********998645699**************************************************** PP

    UPF0029 100 kaakea 105
                +aa+ a
  VIMSS2591 115 SAAEMA 120
                ***987 PP



Or compare VIMSS2591 to CDD or PaperBLAST