VIMSS40090 has 217 amino acids
Query: UPF0029 [M=106]
Accession: PF01205.23
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-46 141.0 0.6 1e-45 140.4 0.0 1.6 2 VIMSS40090
Domain annotation for each sequence (and alignments):
>> VIMSS40090
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 140.4 0.0 1e-45 1e-45 2 105 .. 20 123 .. 19 124 .. 0.96
2 ? -2.2 0.1 0.25 0.25 1 25 [. 155 179 .. 155 186 .. 0.78
Alignments for each domain:
== domain 1 score: 140.4 bits; conditional E-value: 1e-45
UPF0029 2 kSkFiahaapveseeeakelleelkkehkkAtHnvyAyrlegedeierssddgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvraysk 100
kS+Fi+h+ +v++e+ea+e+++++kk+h++AtHn++Ay+++++d+i++++ddgEpsgtAG p+levl+k++l+++++vvtRyfGGikLGaggl+ray k
VIMSS40090 20 KSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVIGENDHIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYGK 118
9***************************************66679****************************************************** PP
UPF0029 101 aakea 105
+++e
VIMSS40090 119 SVSEG 123
99875 PP
== domain 2 score: -2.2 bits; conditional E-value: 0.25
UPF0029 1 kkSkFiahaapveseeeakelleel 25
++S+F+ + ++ +++ e+++++ee
VIMSS40090 155 RESQFLLKEIHYSENVEFETYVEEK 179
5789999999999998988888854 PP
Or compare VIMSS40090 to CDD or PaperBLAST