VIMSS55339 has 210 amino acids
Query: UPF0029 [M=106]
Accession: PF01205.23
Description: Uncharacterized protein family UPF0029
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-38 116.0 0.1 8e-38 115.1 0.0 1.5 2 VIMSS55339
Domain annotation for each sequence (and alignments):
>> VIMSS55339
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 115.1 0.0 8e-38 8e-38 1 106 [] 20 127 .. 20 127 .. 0.96
2 ? -2.9 0.1 0.39 0.39 4 25 .. 159 179 .. 157 191 .. 0.64
Alignments for each domain:
== domain 1 score: 115.1 bits; conditional E-value: 8e-38
UPF0029 1 kkSkFiahaapveseeeakelleelkkehkkAtHnvyAyrleg.ed.eierssddgEpsgtAGkpilevlekeeltnvlvvvtRyfGGikLGagglvra 97
kkS Fi+++a++ + ++ak++++e+k++h +A+Hn++A+++++ e+ sddgEpsgtAGkpil +l+++++ ++++vvtRy+GG++LG+gglv+a
VIMSS55339 20 KKSLFITYLAHTPDLASAKAFVDEIKQRHADARHNCWAFVAGRpENsMLWGLSDDGEPSGTAGKPILAQLTGSHIGEITAVVTRYYGGVLLGTGGLVKA 118
89*************************************99855777999************************************************* PP
UPF0029 98 yskaakeal 106
y +++al
VIMSS55339 119 YGGGVQQAL 127
***999986 PP
== domain 2 score: -2.9 bits; conditional E-value: 0.39
UPF0029 4 kFiahaapveseeeakelleel 25
+F a+ ++++ +e+++ ++e l
VIMSS55339 159 QFSATEMEAHYNEQVEMVVE-L 179
56666667777777776665.4 PP
Or compare VIMSS55339 to CDD or PaperBLAST