PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS1762451 to PF01458 (SUFBD)

VIMSS1762451 has 419 amino acids

Query:       SUFBD  [M=218]
Accession:   PF01458.21
Description: SUF system FeS cluster assembly, SufBD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-74  234.9   0.4    5.5e-74  234.6   0.4    1.1  1  VIMSS1762451  


Domain annotation for each sequence (and alignments):
>> VIMSS1762451  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  234.6   0.4   5.5e-74   5.5e-74       2     217 ..     163     386 ..     162     387 .. 0.98

  Alignments for each domain:
  == domain 1  score: 234.6 bits;  conditional E-value: 5.5e-74
         SUFBD   2 qfertlivveegaevtiieey........agcgvveivvgknAklkyvevqnwsenvlnlatkraeegadakvelvevslggkltrkepsvelkgeg 90 
                   +++r+ + v++ ++v ++e++        + ++v++++vg+ Akl yv+vq +se+++n+ ++r  +++da+ve+  + +g++l+r++++v+l+g+g
  VIMSS1762451 163 VNPRLSLDVGARSSVRVLESHygkagttyFANSVSDVHVGESAKLVYVRVQAESESAVNIGRTRLVVEKDANVESLAFATGARLSRHSLDVILNGPG 259
                   689999**************999999999889***************************************************************** PP

         SUFBD  91 aeaelngvylakgkqhldtgtkvdhngpntsseilskgvlkdksravfrGkikvekgaqktdahqecrnLllsdkaradtkPeleieaddvkcsHgA 187
                   +++e+ gvy ++g+qh+d+++ ++h+  ++++++l+kg+l+++sravf G++++ekgaqk+++ q ++nLlls ka+ad+kP l+i+addvk++Hg+
  VIMSS1762451 260 SNTEILGVYAVRGNQHVDNTSLINHKVGECNTNQLYKGILDGESRAVFCGTVRIEKGAQKANSAQLNNNLLLSGKAEADSKPCLQIYADDVKAAHGS 356
                   ************************************************************************************************* PP

         SUFBD 188 tvgkideeqlfYLmsRGlseeeArrlivrg 217
                   tvg+++ e+lfYL+sR +++e+A  ++ +g
  VIMSS1762451 357 TVGQLNREELFYLQSRAIPKEKAIPMLSYG 386
                   **************************9988 PP



Or compare VIMSS1762451 to CDD or PaperBLAST