PaperBLAST – Find papers about a protein or its homologs

 

Align WP_021789810.1 to PF01458 (SUFBD)

WP_021789810.1 has 403 amino acids

Query:       SUFBD  [M=218]
Accession:   PF01458.21
Description: SUF system FeS cluster assembly, SufBD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-50  158.2   0.4    1.6e-50  157.9   0.4    1.1  1  WP_021789810.1  


Domain annotation for each sequence (and alignments):
>> WP_021789810.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.9   0.4   1.6e-50   1.6e-50       4     218 .]     153     377 ..     150     377 .. 0.96

  Alignments for each domain:
  == domain 1  score: 157.9 bits;  conditional E-value: 1.6e-50
           SUFBD   4 ertlivveegaevtiieey......agc....gvveivvgknAklkyvevqnwsenvlnlatkraeegadakvelvevslggkltrkepsvelkg 88 
                     e+++i +++ ++v+++e+       +g+    + + i++ ++A+l+y  +q++++ v  ++ +r+ +++++++++++v+ g++  +   +++++g
  WP_021789810.1 153 EKNIILIGKFSKVNLVESRytegeaSGNptqgKATYIFLDEGASLEYNYLQDKNTAVNDITYVRTFQEKSSNFKIFHVNHGSGKLLFVNESTQEG 247
                     789*************8887877763337777*************************************************************** PP

           SUFBD  89 egaeaelngvylakgkqhldtgtkvdhngpntsseilskgvlkdksravfrGkikvekgaqktdahqecrnLllsdkaradtkPeleieaddvkc 183
                     ++++ ++ g+ + +g+q +d++      g+ ts++i ++gv+k++s+++ rG+i++e  +  + ++ +++ Llls+++ a++kP l i++++ + 
  WP_021789810.1 248 DESDYRVFGASFSNGHQAIDVRDSSFQIGKSTSADIEVRGVVKGSSTTIHRGNIDIELPSILSTGFYDSKILLLSKEGYANSKPALIIRNNNTRS 342
                     *********************************************************************************************** PP

           SUFBD 184 sHgAtvgkideeqlfYLmsRGlseeeArrlivrgf 218
                     +Hg++++++d+eq+ YL+sRG++e++A+ li+ gf
  WP_021789810.1 343 KHGSAISSVDKEQILYLESRGIDEKTATTLITGGF 377
                     ********************************998 PP



Or compare WP_021789810.1 to CDD or PaperBLAST