PaperBLAST – Find papers about a protein or its homologs

 

Align WP_048164512.1 to PF01458 (SUFBD)

WP_048164512.1 has 442 amino acids

Query:       SUFBD  [M=218]
Accession:   PF01458.21
Description: SUF system FeS cluster assembly, SufBD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-63  199.9   0.0    2.9e-63  199.6   0.0    1.1  1  WP_048164512.1  


Domain annotation for each sequence (and alignments):
>> WP_048164512.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.6   0.0   2.9e-63   2.9e-63       2     218 .]     191     414 ..     190     414 .. 0.95

  Alignments for each domain:
  == domain 1  score: 199.6 bits;  conditional E-value: 2.9e-63
           SUFBD   2 qfertlivveegaevtiieeyagc............gvveivvgknAklkyvevqnwsenvlnlatkraeegadakvelvevslggkltrkepsv 84 
                     q+++++i +e+++ev++i   +gc             ++e +++++A++k++ +qnw e v+  + +ra+ g++a++  ++v lg++ +      
  WP_048164512.1 191 QAPHIVILAEKNSEVHLI---EGCtspvlvkhslhlDMTEAYLHEGASVKLSVLQNWPEYVHTRPMTRAKIGKNAQFINTTVGLGSGKSNIANPK 282
                     899***************...666666666777777**************************************************988665555 PP

           SUFBD  85 elkgegaeaelngvylakgkqhldtgtkvdhngpntsseilskgvlkdksravfrGkikvekgaqktdahqecrnLllsdkaradtkPeleiead 179
                     +   eg+ +elng++l++++  +d+g ++ ++g+++++   sk+v+ d+s+++ rG i  + +a kt++h++c++Ll+sdka+++t+P l  + d
  WP_048164512.1 283 YWVDEGGYVELNGILLGQKDFYVDLGGEMYLQGKGARGINASKAVIMDESTVITRGII--HAQAPKTKGHISCDALLMSDKAKMETYPGLVSRVD 375
                     6667******************************************************..999******************************** PP

           SUFBD 180 dvkcsHgAtvgkideeqlfYLmsRGlseeeArrlivrgf 218
                     d+++sH+A++gki ee+lfYLmsRGlseeeA++livrgf
  WP_048164512.1 376 DAELSHEAAIGKIKEEELFYLMSRGLSEEEATQLIVRGF 414
                     **************************************9 PP



Or compare WP_048164512.1 to CDD or PaperBLAST