F1S849 has 853 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-33 101.6 0.1 3.5e-33 100.9 0.1 1.3 1 F1S849
Domain annotation for each sequence (and alignments):
>> F1S849
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 100.9 0.1 3.5e-33 3.5e-33 3 171 .. 262 421 .. 260 431 .. 0.91
Alignments for each domain:
== domain 1 score: 100.9 bits; conditional E-value: 3.5e-33
CNNM 3 allllllsaffsaaEtAlvslsklrl....eelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvfG 101
+ lll+ls++fs+++++l++l++ +l + ek++ +akr+++++++ + lL +ll+gn lvn+ l++l++ ++ + l +a+v+ t+ i++fG
F1S849 262 ISLLLCLSGMFSGLNLGLMALDPMELrivqNCGTEKEKNYAKRIEPVRRQGNYLLCSLLLGNVLVNTTLTILLDDIAGSGL--------VAVVVSTIGIVIFG 356
568889********************77775555666689************************************99987........577777******** PP
CNNM 102 EilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslvees 171
Ei+P++++ ++ +++ ++ +++++++ ++P+++++++l++++l ++e ++++ +e l +++++
F1S849 357 EIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDCVL-----GQEIGTVYNREKLLEMLRVT 421
*********************************************.....9***************9876 PP
Or compare F1S849 to CDD or PaperBLAST