SwissProt::Q0GA42 has 951 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-25 74.2 0.0 8.4e-25 73.5 0.0 1.3 1 SwissProt::Q0GA42
Domain annotation for each sequence (and alignments):
>> SwissProt::Q0GA42
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 73.5 0.0 8.4e-25 8.4e-25 2 170 .. 228 403 .. 227 413 .. 0.88
Alignments for each domain:
== domain 1 score: 73.5 bits; conditional E-value: 8.4e-25
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvni.llsalatalfaellae....... 81
allll+lsa+fs++ ++l+sl++++l+ l+++g+ ++a+r++ ++ + ++lL tll+g +n l+++l+++l + +
SwissProt::Q0GA42 228 GALLLLALSALFSGLRLSLLSLDPVELRVLRNSGSaaeqEQARRVQAVRGRGTHLLCTLLLGQAGANAaLAGWLYASLPPGVGDPgedsgea 319
57999**********************88888887777799**************************725799*****77777778878653 PP
CNNM 82 galavviatviv.tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslvee 170
g +++ ++v t ++++ +Ei+P +++ ++ ++ia+ ++ ++r+l+ +P++++l++l+++ l +e ++++t+e l + +++
SwissProt::Q0GA42 320 G-VHFPWLPALVcTGAVFLGAEICPYSVCSRHGLAIASHSVCLTRLLMAAAFPVCYPLGRLLDWAL-----RQEISTFYTREKLLETLRA 403
2.33333335555*****************************************************.....8999*******99887765 PP
Or compare SwissProt::Q0GA42 to CDD or PaperBLAST