VIMSS100843 has 444 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-50 155.1 2.8 1.2e-49 154.5 2.8 1.2 1 VIMSS100843
Domain annotation for each sequence (and alignments):
>> VIMSS100843
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 154.5 2.8 1.2e-49 1.2e-49 2 179 .. 15 199 .. 14 203 .. 0.95
Alignments for each domain:
== domain 1 score: 154.5 bits; conditional E-value: 1.2e-49
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae........galavviatv 91
++++l ll+affsa+E+Alvsl+++r+e++a++g+k+ +rll++le+p+++Lst+++g+t++++l++a ++a + ++++ +++ +i++v
VIMSS100843 15 LLVVLTLLNAFFSASEMALVSLNRSRVEQKAADGDKKYARLLRVLEEPNHFLSTIQVGITFISLLSGASLSASLGKVISGwlgnsataRTAGTIISLV 112
779999**************************************************************9999988888778888***988999***** PP
CNNM 92 ivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.kkeeepavteeelrslveeseeeGviee 179
++t++ +v+GE+ Pk++a++ +k+a+++ap++ l +l++P+vwll++++nl+ rl+ + ++ ++++t++e++ +++ se+ +++
VIMSS100843 113 FLTYVSIVLGELYPKRIAMNLKDKLAIVSAPIIIGLGRLVSPFVWLLSASTNLLSRLTPMtFDDADEQMTRDEIEYMLSKSEAT--LDA 199
*********************************************************************************987..343 PP
Or compare VIMSS100843 to CDD or PaperBLAST