VIMSS10088170 has 423 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-39 120.5 2.0 5e-39 119.9 2.0 1.2 1 VIMSS10088170
Domain annotation for each sequence (and alignments):
>> VIMSS10088170
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.9 2.0 5e-39 5e-39 2 179 .. 18 189 .. 17 191 .. 0.92
Alignments for each domain:
== domain 1 score: 119.9 bits; conditional E-value: 5e-39
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakr....llkllenperlLstlligntlvnillsalatalfaellaegalavviatviv 93
+++ll+l+++++s+++++l+s+s ++le la++g+++ + +l++++n++ lL tlli+n ++ +l+++++al++ + a +++
VIMSS10088170 18 VIVLLVLFAGLMSGLTLGLMSMSLVDLEVLAKSGTPRDRIhaakILPVVKNQHLLLCTLLICNAAAMEALPIFLDALVTAWGA----------ILI 103
679999*****************************665544444*************************************96..........555 PP
CNNM 94 .tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee....Gviee 179
++lil+fGEi+P++++ ++ ++i vap++rvl++++ P++w++++l++++l ++ + +++ el++lv+++ +e G++ +
VIMSS10088170 104 sVTLILLFGEIIPQSVCSRHGLAIGATVAPFVRVLVWICLPVAWPISKLLDFLL-----GHGRVALFRRAELKTLVDLHGNEagkgGELTH 189
5*****************************************************.....999****************9988666666655 PP
Or compare VIMSS10088170 to CDD or PaperBLAST