VIMSS10103233 has 424 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.1e-39 120.6 2.3 4.4e-39 120.1 2.3 1.2 1 VIMSS10103233
Domain annotation for each sequence (and alignments):
>> VIMSS10103233
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 120.1 2.3 4.4e-39 4.4e-39 2 177 .. 18 187 .. 17 191 .. 0.93
Alignments for each domain:
== domain 1 score: 120.1 bits; conditional E-value: 4.4e-39
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatviv 93
++++l+l+++++s+++++l+sls ++le la++g+ k+a+++l++++n++ lL+tlli+n ++ l+++++ l++ + a +++
VIMSS10103233 18 VIVFLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTpehrKYAAKILPVVKNQHLLLVTLLICNAAAMETLPIFLDGLVTAWGA----------ILI 103
679******************************99888789999*************************************96..........555 PP
CNNM 94 .tllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseee....Gvi 177
++lil+fGEi+P++++ ++ ++i vap++rvl++++ P++w++++l++++l +++++ +++ el++lv+ + +e G++
VIMSS10103233 104 sVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVFICLPVAWPISKLLDFLL-----GHRRAALFRRAELKTLVDFHGNEagkgGEL 187
5*****************************************************.....9****************9887775555555 PP
Or compare VIMSS10103233 to CDD or PaperBLAST