VIMSS117389 has 443 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-50 156.4 3.1 5e-50 155.8 3.1 1.2 1 VIMSS117389
Domain annotation for each sequence (and alignments):
>> VIMSS117389
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.8 3.1 5e-50 5e-50 2 179 .. 15 199 .. 14 204 .. 0.95
Alignments for each domain:
== domain 1 score: 155.8 bits; conditional E-value: 5e-50
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae........galavviatv 91
++++l +l+affsa+E+A+vsl+++r+e++ae+g+++ rllk+lenp+++Lst+++g+tl++il++a +t ++ +++a +a+a +++++
VIMSS117389 15 LLFILTVLNAFFSATEMAMVSLNRARVEQKAEEGDRRYIRLLKVLENPNHFLSTIQVGITLITILSGASLTDTLGRVIASwlgngetaQAVATFLSLA 112
568899*******************************************************************9999999999999888888888999 PP
CNNM 92 ivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.kkeeepavteeelrslveeseeeGviee 179
++t++ +vfGE+ Pk++al+ +++a+++ap++ + +l++P+vwll +++n++ l+ + ++ ++ +t++e+ ++++see +++
VIMSS117389 113 FLTYISIVFGELYPKRIALNLKDALAIRTAPIIIGIGKLVSPFVWLLAASTNFLSHLTPMsFDDADEKMTRDEIAYMLTNSEET--LDA 199
99*******************************************************************************998..333 PP
Or compare VIMSS117389 to CDD or PaperBLAST