VIMSS1244466 has 419 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.7e-61 190.7 8.4 1.8e-60 189.8 8.4 1.4 1 VIMSS1244466
Domain annotation for each sequence (and alignments):
>> VIMSS1244466
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 189.8 8.4 1.8e-60 1.8e-60 1 174 [. 8 181 .. 8 196 .. 0.97
Alignments for each domain:
== domain 1 score: 189.8 bits; conditional E-value: 1.8e-60
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtlli 97
+i+++l+++saffs++EtA+++l+k++l++la+k+++ akr l+l++nperlL+++lignt++ni++++++++ ++++ g+l+++iat++vt+l+
VIMSS1244466 8 IIIFILICISAFFSSSETAMMALNKYKLKHLAKKNHRAAKRSLSLVRNPERLLVAILIGNTFANIFAGTVISSYSEDHF--GDLGLLIATIVVTILV 102
689****************************************************************************..89************** PP
CNNM 98 lvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseee 174
lvfGEi+Pk++a+ +++++a+ ++ pl++++++lyP+v++l++++++ l+l+Gv ++ +++ +++ee++++v+es+++
VIMSS1244466 103 LVFGEIIPKSFAAIYPQRLAFPFSLPLKIIMLILYPAVIFLSMVSKVTLKLFGVkiEAVNNESLDKEEIQTVVNESNAK 181
****************************************************************************987 PP
Or compare VIMSS1244466 to CDD or PaperBLAST