VIMSS125350 has 434 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-52 162.3 4.9 6.3e-52 161.9 4.9 1.1 1 VIMSS125350
Domain annotation for each sequence (and alignments):
>> VIMSS125350
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 161.9 4.9 6.3e-52 6.3e-52 4 177 .. 19 193 .. 16 198 .. 0.95
Alignments for each domain:
== domain 1 score: 161.9 bits; conditional E-value: 6.3e-52
CNNM 4 llll.llsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvf 100
+++l ++saffs++EtAl+++s++r+++l ++g+++a + +l+e+++rl+ tllign+lvnil+s+l+t+l++ l+ g+ +v+iatv++t+l+++f
VIMSS125350 19 VICLlVISAFFSGSETALTAASRSRMHTLENNGEERAGMVTRLIERRDRLIGTLLIGNNLVNILASSLTTSLLIGLF--GDSGVAIATVAMTVLLVIF 114
455549***********************************************************************..799**************** PP
CNNM 101 GEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvi 177
+E+lPk++a++ ++++alavap +r ++ ++ P++ l+n++ + il l+G+ +++ + eelr v++ ++eG +
VIMSS125350 115 SEVLPKSWAIASPDRFALAVAPWVRPFVAVVGPISSLVNAIVRRILHLFGInlSSDLPMLTAHEELRGAVNLLHREGSV 193
****************************************************88888888889***********99976 PP
Or compare VIMSS125350 to CDD or PaperBLAST