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Align VIMSS162666 to PF01595 (CNNM)

VIMSS162666 has 350 amino acids

Query:       CNNM  [M=181]
Accession:   PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-49  154.2   5.4      3e-49  153.2   5.4    1.5  1  VIMSS162666  


Domain annotation for each sequence (and alignments):
>> VIMSS162666  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.2   5.4     3e-49     3e-49       3     181 .]       8     179 ..       5     179 .. 0.98

  Alignments for each domain:
  == domain 1  score: 153.2 bits;  conditional E-value: 3e-49
         CNNM   3 allllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvf 100
                  +++++l sa++s++EtAl+s+s+lr+++la+++n++a +ll ++e+ +r ++t++i+n++ ni+ s++++ +++++l  g+ ++ i+ +++t+li++f
  VIMSS162666   8 IFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIATIVILNNIFNIIGSIVTGGVATQAL--GSQWLGIFSAVLTFLIIIF 103
                  467789***********************************************************************..7899*************** PP

         CNNM 101 GEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
                  GEi+Pktl+ ++ e+i+l+ a p+  lsi+++Plvw+l+ ++  +      k++++p++ e e++ l +++++eG+ie++e
  VIMSS162666 104 GEIIPKTLGERYCEPISLLAAIPITGLSIVFTPLVWILENVTAPFS-----KGKKRPTTNEAEIKLLANIGQQEGIIESDE 179
                  **********************************************.....9**************************997 PP



Or compare VIMSS162666 to CDD or PaperBLAST