VIMSS1748219 has 364 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-49 152.4 7.1 7.2e-49 152.0 7.1 1.1 1 VIMSS1748219
Domain annotation for each sequence (and alignments):
>> VIMSS1748219
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 152.0 7.1 7.2e-49 7.2e-49 1 181 [] 8 202 .. 8 202 .. 0.99
Alignments for each domain:
== domain 1 score: 152.0 bits; conditional E-value: 7.2e-49
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............gala 85
l+++lll+++aff+aaE+Al+s+++ rl++lae+g+k+a ++ + e+++ +L+ ++g+t+++ill+ ++++++a+ll++ ++++
VIMSS1748219 8 LLTVLLLAANAFFVAAEFALISARRDRLQALAEQGKKSAITVIRAGEHLSLMLAGSQLGITICSILLGRVGEPAVAHLLEKpfaligvsdtvlHTVS 104
6899***************************************************************************99**************** PP
CNNM 86 vviatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvieee 180
+v+a+++v++l++++GE++Pk++a++ +e+ a++++pp + ++ +P++++ n++an+ lr +Gv +e ++av+ el ++++es +eG ++ e
VIMSS1748219 105 FVVALAVVVILHVLLGEMVPKNIAIAGPETAAMLLIPPYLLYIRAARPFIAFYNWCANATLRAFGVepRDELASAVSTVELSEMIAESVSEGLLDTE 201
*******************************************************************99*************************998 PP
CNNM 181 e 181
e
VIMSS1748219 202 E 202
7 PP
Or compare VIMSS1748219 to CDD or PaperBLAST